The FastqcDataList Object Class

Source: R/FastqcDataList.R

The FastqcDataList Object Class [Stable]

FastqcDataList(x)

Arguments

x

Character vector of file paths specifying paths to FastQC reports

Value

An object of class FastqcDataList

Slots

...

this can either be a single character vector of paths to FASTQC files, or several instances of .FastqcFile objects

Examples


# Get the files included with the package
packageDir <- system.file("extdata", package = "ngsReports")
fl <- list.files(packageDir, pattern = "fastqc.zip", full.names = TRUE)

# Load the FASTQC data as a FastqcDataList object
fdl <- FastqcDataList(fl)
fdl
#> FastqcDataList for 6 files.